One fateful day, all of humanity was petrified by a blinding flash of light. After several millennia, high schooler Taiju awakens and finds himself lost in a world of statues. However, he’s not alone! His science-loving friend Senku’s been up and running for a few months and he’s got a grand plan in mind, to kickstart civilization with the power of science!

The story is set in 2027, one year after the end of the fourth non-nuclear war. New Port City is still reeling from the war’s aftermath when it suffers a bombing caused by a self-propelled mine. Then, a military member implicated in arms-dealing bribes is gunned down. During the investigation, Public Security Section’s Daisuke Aramaki encounters Motoko Kusanagi, the cyborg, wizard-level hacker assigned to the military’s 501st Secret Unit. Batou, a man with the “eye that does not sleep,” suspects that Kusanagi is the one behind the bombing. The Niihama Prefectural Police detective Togusa is pursuing his own dual cases of the shooting death and a prostitute’s murder. Motoko herself is being watched by the 501st Secret Unit’s head Kurutsu and cyborg agents.