It is a time of chaos. Earth is no longer what it used to be. It has been infested with a bug like species called the Blue. Yuji Kaido, who has a mysterious disease, is put into suspended animation until a cure is found. When he wakes up Yuji learns that its been more than 20 years since he was put into suspended animation, and the world is now controled by these creatures. He joins a group of soldiers equipped with powerful mechas to fight against the Blue for hope of a better future.

Ten years have passed since Goku left his friends and family to hone his skills. But Goku soon finds himself helpless against the mystical power of the Dragon Balls and an accidental wish made by the devious Emperor Pilaf. His desire; that Goku once again become a child! Not daunted by this small setback, Goku, together with Trunks, and his own granddaughter Pan, blast off into the outer reaches of space in search of the mysterious Blackstar Dragon Balls. But these Dragon Balls have a fatal secret: if not collected within one year Earth will be destroyed.

The story of the film is set after the conflict instigated by Toyotomi Hideyoshi ended, but not before the Battle of Sekigahara determines who shall be the Shogun of Japan.